Building scilab-master-1286272063 on Fedora 13

Dean S. Messing deanm at sharplabs.com
Thu Oct 14 21:24:07 CEST 2010


Hello developers.

This is the continuation of a thread over on [scilab-Users]
that Sylvestre asked me to move here.  What I had to do to get
./configure to complete may be found here:
<http://lists.scilab.org/cgi-bin/ezmlm-browse?list=users&cmd=showmsg&msgnum=3023>

Now I'm trying to "make" scilab.  The "make" died here:

/usr/bin/ld: cannot find -llapack
collect2: ld returned 1 exit status
make[2]: *** [libsciarnoldi.la] Error 1
make[2]: Leaving directory `/usr/local/src/Scilab/scilab-master-1286272063/modules/arnoldi'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/usr/local/src/Scilab/scilab-master-1286272063/modules'
make: *** [all-recursive] Error 1


However: 

`locate liblapack' returns

/usr/lib64/atlas/liblapack.so
/usr/lib64/atlas/liblapack.so.3
/usr/lib64/atlas/liblapack.so.3.0

There's no references to /usr/lib64/atlas anywhere in the output of
`make' so far.

But ./configure found the atlas and lapack stuff just fine (after I
added the appropriate "--with" switches. I note that
  "BLAS/LAPACK/ATLAS Configuration:"
contains no reference to  -L/usr/lib64/atlas on
the "BLAS LIBS" line.

How should I _correctly_ proceed?  (I suspect a fix would be to put
simlinks in /usr/lib64 to all the .so files in /usr/lib64/atlas/ but
that's a hack.)

Below I've appended the output of ./configure.

Regards,
Dean

########## Output from successful ./configure #########


==> scilab-master-1286272063=>PATH=${PATH}:/usr/share/pvm3/lib ./configure\
            --with-blas-library=/usr/lib64/atlas\
            --with-lapack-library=/usr/lib64/atlas\
            --with-umfpack-library=/usr/lib64/atlas 

MORE>>MORE>>checking whether ln -s works... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for a BSD-compatible install... /usr/bin/install -c
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for ld used by GCC... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library path variable... LD_LIBRARY_PATH
checking whether to activate relocatable installation... no
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
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checking for sys/stat.h... yes
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checking for shared library run path origin... done
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... (cached) /bin/grep
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for g77... no
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checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking if gfortran is a fortran 90 compatible compiler... yes
checking size of int... 4
checking size of long... 8
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... gcc3
checking for g++... yes
checking whether gcc and cc understand -c and -o together... yes
checking whether gfortran understands -c and -o together... yes
checking for nm... nm
checking for leading underscores with Fortran (name-mangling scheme)... no
checking for trailing underscores with Fortran (name-mangling scheme)... yes
checking use of the sharpsign in CPP... yes
Define C2F with Trailing Underscore and Sharp Sign
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fopen in -lhdf5... yes
checking JAVA_HOME variable... not defined
checking for javac... /usr/bin/javac
checking Symlink for /usr/bin/javac... /etc/alternatives/javac
checking Symlink for /etc/alternatives/javac... /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/javac
Java base directory (probably) available here : /usr/lib/jvm/java-1.6.0-sun.x86_64
checking for zip or jar files to include on CLASSPATH... 
checking to see if the java compiler works... yes
Using JAVAC=/usr/lib/jvm/java-1.6.0-sun.x86_64/bin/javac
Java found in /usr/lib/jvm/java-1.6.0-sun.x86_64
checking type of jvm... jdk
checking java API version... 1.5
Using the following JNI include flags -I/usr/lib/jvm/java-1.6.0-sun.x86_64/include -I/usr/lib/jvm/java-1.6.0-sun.x86_64/include/linux
checking if jni.h can be included... yes
Looking for JNI libs with x86_64 as machine hardware name
Looking for /usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/x86_64/libjava.so
Looking for /usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64/libjava.so
Found /usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64/libjava.so
Using the following JNI library flags -L/usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64 -ljava -lverify -L/usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64/server -ljvm
Using the following runtime library path /usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64:/usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64/server
checking to see if we can link a JNI application... yes
checking for zip or jar files to include on CLASSPATH... 
checking for java... /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/java
checking for java_g... no
checking for javah... /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/javah
checking for jar... /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/jar
checking for jdb... /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/jdb
checking for ant... /usr/bin/ant
checking jgraphx... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jgraphx.jar
checking minimal version (1.4.1.0) of jgraphx... yes
checking flexdock... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/flexdock-0.5.2.jar
checking minimal version (0.5.2) of flexdock... yes
checking looks... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/looks-2.1.1.jar
checking skinlf... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/skinlf.jar
checking jogl... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jogl.jar
checking for glTexParameterf in -ljogl... yes
checking gluegen-rt... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/gluegen-rt.jar
checking for Java_com_sun_gluegen_runtime_UnixDynamicLinkerImpl_dlclose__J in -lgluegen-rt... yes
checking jhall... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jhall.jar
checking jrosetta-API... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jrosetta-API.jar
checking jrosetta-engine... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jrosetta-engine.jar
checking jeuclid-core... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jeuclid-core.jar
checking fop... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/fop.jar
checking batik-all... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/batik-all-1.7.jar
checking minimal version (1.7) of batik... yes
checking commons-io... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/commons-io.jar
checking xmlgraphics-commons... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/xmlgraphics-commons-1.3.1.jar
checking avalon-framework... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/avalon-framework.jar
checking xml-apis-ext... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/xml-apis-ext.jar
checking commons-logging... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/commons-logging.jar
checking jlatexmath... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jlatexmath-0.9.3.jar
checking minimal version (0.9.3) of jlatexmath... yes
checking checkstyle... /usr/share/java//checkstyle.jar
checking commons-beanutils... /usr/share/java//commons-beanutils.jar
checking antlr... /usr/share/java//antlr.jar
checking testng... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/testng.jar
checking qdox... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/qdox.jar
checking bsh... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/bsh.jar
checking junit... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/junit.jar
checking for sleep... yes
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checking for working strtod... yes
checking limits.h usability... yes
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checking values.h usability... yes
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checking fcntl.h usability... yes
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checking float.h usability... yes
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checking libintl.h usability... yes
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checking locale.h usability... yes
checking locale.h presence... yes
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checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking netdb.h usability... yes
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checking netinet/in.h usability... yes
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checking time.h usability... yes
checking time.h presence... yes
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checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking whether time.h and sys/time.h may both be included... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for struct stat.st_blksize... yes
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checking whether NLS is requested... yes
checking for msgfmt... /usr/bin/msgfmt
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checking for CFPreferencesCopyAppValue... no
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checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
checking whether closedir returns void... no
checking return type of signal handlers... void
checking whether struct tm is in sys/time.h or time.h... time.h
checking for struct stat.st_blocks... yes
checking for main in -lcurses... yes
checking for library containing tgetent... none required
checking ncurses.h usability... yes
checking ncurses.h presence... yes
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checking curses.h usability... yes
checking curses.h presence... yes
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checking for dlopen in -ldl... yes
checking for library containing pthread_join... -lpthread
checking for clock_gettime in -lrt... yes
checking for ocamlc... ocamlc
checking for ocamlopt... ocamlopt
checking for ocamldep... ocamldep
checking for ocamlyacc... ocamlyacc
checking for ocamllex... ocamllex
checking jhdf5... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jhdf5.jar
checking for h5JNIFatalError in -ljhdf5... yes
checking minimal version (1.8.4) of hdf5... yes
checking for ocamlc... (cached) ocamlc
checking for ocamlopt... (cached) ocamlopt
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checking for ocamlyacc... (cached) ocamlyacc
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checking fftw3.h usability... yes
checking fftw3.h presence... yes
checking for fftw3.h... yes
checking for fftw_plan_dft_r2c in -lfftw3... yes
checking if PVM_ROOT has been set... no.  I will try to guess a value for it
checking for pvmgetarch... /usr/share/pvm3/lib/pvmgetarch
checking for PVM architecture... LINUXX86_64
checking PVM header files... PVM header found in /usr/share/pvm3/include
checking pvm3.h usability... yes
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checking for a reasonable guess at PVM_ROOT since PVM_ROOT was not set... /usr/share/pvm3
checking for PVM libraries... found libpvm3 in /usr/share/pvm3/lib/LINUXX86_64
checking for library containing pvm_spawn... -lpvm3
checking for library containing pvm_barrier... -lgpvm3
checking omp.h usability... yes
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checking for xml2-config... xml2-config
checking for xmlReaderForFile in -lxml2... yes
checking for bind_textdomain_codeset... yes
checking for msgcat... /usr/bin/msgcat
checking if BLAS, ATLAS or MKL is available... 
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -L/usr/lib/gcc/x86_64-redhat-linux/4.4.4 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.4/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.4.4/../../.. -lpthread -ldl -lcurses -lgfortranbegin -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for sgemm_... no
checking for ATL_xerbla in -latlas... yes
checking for sgemm_ in -lf77blas... yes
checking for cblas_dgemm in -lcblas... yes
Atlas found
checking if LAPACK is available... 
checking for cheev_... no
checking for cheev_ in -llapack... yes
Library -llapack found
checking suitesparse/umfpack.h usability... yes
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checking for suitesparse/umfpack.h... yes
checking for umf_divcomplex in /usr/lib64/atlas... checking for amd_info in -lamd... yes
checking for umf_divcomplex in -lumfpack... yes
yes
checking for pcre-config... pcre-config
checking for pcre_compile in -lpcre... yes
checking for regexec in -lpcreposix... yes
checking pcre.h usability... yes
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checking for pcre.h... yes
checking for X... libraries , headers 
checking for gethostbyname... (cached) yes
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checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking for main in -ldl... yes
checking for header file tcl.h... found in /usr/include 
checking if tcl is version 8.4 or later... (8.5) yes
checking for tcl library tcl8.5... found /usr/lib64/libtcl8.5.so using -L/usr/lib64 -ltcl8.5
checking for Tcl_DoOneEvent in -ltcl8.5... yes
checking X11/Xlib.h usability... yes
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checking for header file tk.h... found in /usr/include 
checking if tk is version 8.4 or later... (8.5) yes
checking for tk library tk8.5... found /usr/lib64/libtk8.5.so using -L/usr/lib64 -ltk8.5
checking for Tk_BindEvent in -ltk8.5... yes
checking for MATIO... yes
checking matio.h usability... yes
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checking matioConfig.h usability... yes
checking matioConfig.h presence... yes
checking for matioConfig.h... yes
checking for Mat_Open in -lmatio... yes
checking saxon... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/saxon.jar
checking jlatexmath-fop... /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jlatexmath-fop-0.9.3.jar
checking how to print strings... printf
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checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... nm
checking the name lister (nm) interface... BSD nm
checking the maximum length of command line arguments... 1966080
checking whether the shell understands some XSI constructs... yes
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checking how to recognize dependent libraries... pass_all
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checking command to parse nm output from gcc object... ok
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
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checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
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checking for dlopen... yes
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checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
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checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
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checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... no
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for splint... no
configure: creating ./config.status
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config.status: creating modules/graphic_export/Makefile
config.status: creating modules/renderer/Makefile
config.status: creating modules/action_binding/Makefile
config.status: creating modules/gui/Makefile
config.status: creating modules/pvm/Makefile
config.status: creating modules/randlib/Makefile
config.status: creating modules/tclsci/Makefile
config.status: creating modules/windows_tools/Makefile
config.status: creating modules/core/Makefile
config.status: creating modules/api_scilab/Makefile
config.status: creating modules/call_scilab/Makefile
config.status: creating modules/types/Makefile
config.status: creating modules/hdf5/Makefile
config.status: creating modules/fftw/Makefile
config.status: creating modules/umfpack/Makefile
config.status: creating modules/scicos/Makefile
config.status: creating modules/scicos_blocks/Makefile
config.status: creating modules/functions/Makefile
config.status: creating modules/dynamic_link/Makefile
config.status: creating modules/overloading/Makefile
config.status: creating modules/javasci/Makefile
config.status: creating modules/maple2scilab/Makefile
config.status: creating modules/m2sci/Makefile
config.status: creating modules/compatibility_functions/Makefile
config.status: creating modules/texmacs/Makefile
config.status: creating modules/development_tools/Makefile
config.status: creating modules/output_stream/Makefile
config.status: creating modules/console/Makefile
config.status: creating modules/demo_tools/Makefile
config.status: creating modules/genetic_algorithms/Makefile
config.status: creating modules/simulated_annealing/Makefile
config.status: creating modules/parameters/Makefile
config.status: creating modules/matio/Makefile
config.status: creating modules/atoms/Makefile
config.status: creating modules/xcos/Makefile
config.status: creating modules/scinotes/Makefile
config.status: creating modules/ui_data/Makefile
config.status: creating modules/graph/Makefile
config.status: creating modules/parallel/Makefile
config.status: creating modules/modules_manager/Makefile
config.status: creating modules/history_browser/Makefile
config.status: creating modules/Makefile
config.status: creating libs/Makefile
config.status: creating Makefile
config.status: creating scilab.pc
config.status: creating etc/modules.xml
config.status: creating etc/classpath.xml
config.status: creating etc/jvm_options.xml
config.status: creating scilab-lib.properties
config.status: creating scilab-lib-doc.properties
config.status: creating modules/core/includes/machine.h
config.status: executing depfiles commands
config.status: executing po-directories commands
config.status: executing libtool commands
config.status: executing modules/core/includes/stack.h commands

Scilab is configured as follows. Please verify that this configuration
matches your expectations.

Host system type : x86_64-unknown-linux-gnu

                  Option                        Value
-------------------------------------------------------------------------
Shared libraries.......      --enable-shared=yes	yes
Static libraries.......      --enable-static=no	no
GNU ld.................      --with-gnu-ld=yes		yes
Enable debug ..........      --enable-debug=no	no
Enable debug C.........      --enable-debug-C=no	no
Enable debug C++.......      --enable-debug-CXX=no	no
Enable debug Java......      --enable-debug-java=	
Enable debug Fortran...      --enable-debug-fortran=no	no
Enable stop on warning.      --enable-stop-on-warning=	

Compiler Configuration:
  Intel (--with-intelcompilers) .... =		
  GNU gcc (--with-gcc) ............. =		
  GNU Fortran 77 (--with-g77) ...... =		
  GNU Fortran 95 (--with-gfortran) . =		

Options:
  Use PVM (--without-pvm) .......................... = 
  PVM include (--with-pvm-include) ................. = 
  PVM library (--with-pvm-library) ................. = /usr/share/pvm3/lib/LINUXX86_64
  Compile with Ocaml (--without-ocaml) ............. = 
  Do not use TCL/TK (--without-tk) ................. = 
  TCL include (--with-tcl-include) ................. = 
  TCL library (--with-tcl-library) ................. = 
  TK include (--with-tk-include) ................... = 
  TK library (--with-tk-library) ................... = 
  Install XML Help (--with-install-help-xml) ....... = 
  Compilation tests (--enable-compilation-tests) ... = no
  Make the package relocatable (--enable-relocatable)= no
  Use FFTW (--without-fftw) ........................ = 
  Use MATIO (--without-matio) ...................... = 

Scicos enable

Ocaml Configuration (for Modelica compiler):
  OCAMLC ............. = ocamlc
  OCAMLOPT ........... = ocamlopt
  OCAMLDEP ........... = ocamldep

OpenMP Configuration:
OpenMP CFLAGS ...... = -fopenmp
OpenMP CXXFLAGS .... = -fopenmp
OpenMP LIBS ........ = -lgomp
OpenMP FFLAGS ...... = 

PVM Configuration:
  PVM Architecture ... = LINUXX86_64
  PVM INCLUDE ........ = -I/usr/share/pvm3/include
  PVM LIBS ........... = -L/usr/share/pvm3/lib/LINUXX86_64 -lpvm3 -lgpvm3

FFTW Configuration:
  FFTW LIBS .......... = -lfftw3
  FFTW CFLAGS ........ = 

MATIO Configuration:
  MATIO LIBS .......... = -lmatio -lz  
  MATIO CFLAGS ........ =  

UMFPACK Configuration:
  UMFPACK LIBS ....... = -L/usr/lib64/atlas -lumfpack -lamd
  UMFPACK CFLAGS ..... = 
  UMFPACK SUITESPARSE  = Yes

BLAS/LAPACK/ATLAS Configuration:
  BLAS LIBS ............. = -lcblas -lf77blas -latlas
  BLAS TYPE ............. = Atlas
  LAPACK LIBS ........... = -llapack
  LAPACK TYPE ........... = Library -llapack


Gettext/localization configuration:
  xgettext ............... = /usr/bin/xgettext
  msgfmt  ................ = /usr/bin/msgfmt
  msgfmt_opts ............ = 
  msgcat  ................ = /usr/bin/msgcat

Documentation building configuration:
  Docbook XSL path ....... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/docbook/
  Saxon XSLT ............. = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/saxon.jar
  XML commons external ... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/xml-apis-ext.jar

Java Configuration:
  JAVA_HOME ........... = /usr/lib/jvm/java-1.6.0-sun.x86_64
  JAVAC ............... = /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/javac
  JAVA_CLASSPATH ...... = 
  JAVA_VERSION ........ = 1.5
  JAVAC_FLAGS ......... = -g
  JAVA_JNI_INCLUDE .... = -I/usr/lib/jvm/java-1.6.0-sun.x86_64/include -I/usr/lib/jvm/java-1.6.0-sun.x86_64/include/linux
  JAVA_JNI_LIBS ....... = -L/usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64 -ljava -lverify -L/usr/lib/jvm/java-1.6.0-sun.x86_64/jre/lib/amd64/server -ljvm
  JAVA_JNI_LIBS_PRELOAD = 
  JAVA ................ = /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/java
  JAR ................. = /usr/lib/jvm/java-1.6.0-sun.x86_64/bin/jar
  ANT ................. = /usr/bin/ant

Java dependencies:
  Flexdock ............ = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/flexdock-0.5.2.jar
  JOGL ................ = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jogl.jar
  JOGL LIBS (JNI) ..... = -ljogl
  Gluegen ............. = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/gluegen-rt.jar
  Gluegen LIBS (JNI) .. = -lgluegen-rt
  Jeuclid (MathML) .... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jeuclid-core.jar
  Jhall  .............. = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jhall.jar
  Jrosetta (API) ...... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jrosetta-API.jar
  Jrosetta (Engine) ... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jrosetta-engine.jar
  Commons Logging ..... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/commons-logging.jar
  JGraph X ............ = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jgraphx.jar
  JLaTeXMath .......... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jlatexmath-0.9.3.jar

Documentation, graphic export:
  FOP (XML => PDF) .... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/fop.jar
  JLaTeXMath Fop ...... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jlatexmath-fop-0.9.3.jar
  Batik (SVG) ......... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/batik-all-1.7.jar
  Avalon Framework .... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/avalon-framework.jar
  Commons I/O ......... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/commons-io.jar
  XML graphics commons  = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/xmlgraphics-commons-1.3.1.jar

Code quality (optional):
  Checkstyle .......... = /usr/share/java//checkstyle.jar
  Commons-beanutils ... = /usr/share/java//commons-beanutils.jar
  Antlr ............... = /usr/share/java//antlr.jar
  TestNG .............. = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/testng.jar
  splint .............. = no

TCL/TK configuration:
  TK_INC_PATH ........ = -I/usr/include
  TCL_INC_PATH ....... = -I/usr/include
  TCLTK_LIBS ......... =  -L/usr/lib64 -ltk8.5   -L/usr/lib64 -ltcl8.5  -ldl
  TCL_SERIAL_VERSION . = 8.5.8
  TK_SERIAL_VERSION .. = 8.5.8

XML configuration:
  XML_FLAGS .......... = -I/usr/include/libxml2
  XML_LIBS ........... = -lxml2 -lz -lm
  XML_VERSION ........ = 2.7.7

HDF5 configuration:
  HDF5 CFLAGS ......... = 
  HDF5 LIBS ........... = -lhdf5
  HDF5 Java ........... = /usr/local/src/Scilab/scilab-master-1286272063/thirdparty/jhdf5.jar
  JHDF5 LIBS (JNI) .... = -ljhdf5

PCRE configuration:
  PCRE_CFLAGS ........ = 
  PCRE_LIBS .......... = -lpcreposix -lpcre
  PCRE_VERSION ....... = 7.8

SWIG Configuration:
  SWIG generation disabled

GIWS Configuration:
  GIWS generation disabled

Libtool config:
  objext .............. = o
  libext (static) ..... = a
  shrext_cmds ......... = .so
  exeext .............. = 

Compilation paths:
  srcdir .............. = .
  srcdir_full ......... = /usr/local/src/Scilab/scilab-master-1286272063
  builddir ............ = /usr/local/src/Scilab/scilab-master-1286272063

Platform informations:
  host ........... = x86_64-unknown-linux-gnu
  host_cpu ....... = x86_64
  host_vendor .... = unknown
  host_os ... .... = linux-gnu
  hostname ....... = medulla
  CPU 64 bits .... = true

Options used to compile and link:
  prefix ......... = /usr/local
  localedir ...... = ${datarootdir}/locale
  VERSION ........ = 5
  CC ............. = gcc
  CFLAGS ......... = -g -O2  -DNDEBUG -fno-stack-protector -DNARROWPROTO -m64 -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/
  PCFLAGS ........ = 
  DEFS ........... = -DHAVE_CONFIG_H
  LD ............. = /usr/bin/ld -m elf_x86_64
  LDFLAGS ........ = 
  LIBS ........... = -lpthread -ldl -lcurses  -lm
  CXX ............ = g++
  CPPFLAGS ....... =  -DNDEBUG -fno-stack-protector -I$(top_srcdir)/modules/core/includes/ -I$(top_srcdir)/libs/MALLOC/includes/ -I$(top_srcdir)/modules/localization/includes/
  F77 ............ = gfortran
  FFLAGS ......... = -g -O2 -DNDEBUG -m64 -fPIC -I$(top_srcdir)/modules/core/includes/
  F77_LDFLAGS .... = 
  TERMCAP_LIB .... = no



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