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Hello Lise,<br>
<br>
dgeqpf & zgeqpf seem are <a
href="http://www.netlib.org/lapack/lapack-3.6.0.html">deprecated</a>
in Lapack 3.6+, that may be the issue here, could you please try
with a less recent <a href="http://www.netlib.org/lapack/">version</a>?
3.5.0 should do.<br>
<br>
Let us know hos it goes,<br>
Regards,<br>
Paul<br>
<br>
<div class="moz-cite-prefix">On 02/10/2017 04:37 PM, Lebouc Lise (CS
SI) wrote:<br>
</div>
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<div class="WordSection1">
<p class="MsoNormal">Hi,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span lang="EN-US">I want to install Scilab
5.5.2 from source on Cent OS 7 with the minimal option and I
obtain an error during the compilation step of Scilab.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">My option for configure
are :<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">configure
--prefix=/install_directory<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">
--without-gui<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">
--without-javasci <o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-jdk
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --disable-build-help
<o:p>
</o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --disable-build-localization
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-xcos
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-modelica
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-fftw
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-umfpack
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-matio
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-tk
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-openmp
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> --without-arpack-ng<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">
--with-lapack-library=/install_directory/lapack/3.6.1/lib<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">
--with-blas-library=/install_directory/lapack/3.6.1/lib
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">I used lapack 3.6.1.
Configure worked well but I got this message during the
compilation :<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal">g++ -DHAVE_CONFIG_H -I.
-I./modules/core/includes -I./modules/io/includes/
-I./modules/console/includes/
-I./modules/localization/includes/ -DNDEBUG
-fno-stack-protector -g -O2 -MT
modules/startup/src/c/scilab_bin-mainscic.o -MD -MP -MF
modules/startup/src/c/.deps/scilab_bin-mainscic.Tpo -c -o
modules/startup/src/c/scilab_bin-mainscic.o `test -f
'modules/startup/src/c/mainscic.cpp' || echo
'./'`modules/startup/src/c/mainscic.cpp<o:p></o:p></p>
<p class="MsoNormal">mv -f
modules/startup/src/c/.deps/scilab_bin-mainscic.Tpo
modules/startup/src/c/.deps/scilab_bin-mainscic.Po<o:p></o:p></p>
<p class="MsoNormal">/bin/sh ./libtool --tag=CXX --mode=link
g++ -DNDEBUG -fno-stack-protector -g -O2 -static-libstdc++
-static-libgcc -Wl,--no-as-needed -o scilab-bin
modules/startup/src/c/scilab_bin-mainscic.o
./modules/libscilab.la ./modules/libscilab-cli.la -lxml2 -lz
-lm -ldl -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64
-L/lib/../lib64 -L/usr/lib/../lib64
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lpthread
-ldl -lcurses -lgfortran -lm -lquadmath
./modules/console/libsciconsole-minimal.la
./modules/jvm/libscijvm-disable.la -lpthread -ldl -lcurses
-lm<o:p></o:p></p>
<p class="MsoNormal">libtool: link: g++ -DNDEBUG
-fno-stack-protector -g -O2 -static-libstdc++ -static-libgcc
-Wl,--no-as-needed -o .libs/scilab-bin
modules/startup/src/c/scilab_bin-mainscic.o
./modules/.libs/libscilab.so
-L/work/logiciels/rh7/lapack/3.6.1/lib
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/.libs/libscilab-cli.so
./modules/.libs/libscilab-cli.so -lcurl
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/functions/.libs/libscifunctions.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/call_scilab/.libs/libscicall_scilab.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/localization/.libs/libscilocalization.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/special_functions/.libs/libscispecial_functions.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/completion/.libs/libscicompletion.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/history_manager/.libs/libscihistory_manager.so
-lpcreposix -lpcre
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/hdf5/.libs/libscihdf5.so
-lhdf5 -lhdf5_hl
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/statistics/.libs/libscistatistics.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/xml/.libs/libscixml.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/external_objects/.libs/libsciexternal_objects.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/preferences/.libs/libscipreferences-cli.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/gui/.libs/libscigui-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/graphics/.libs/libscigraphics-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/graphic_export/.libs/libscigraphic_export-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/console/.libs/libsciconsole-minimal.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/action_binding/.libs/libsciaction_binding-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/jvm/.libs/libscijvm-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/xcos/.libs/libscixcos-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/graphic_objects/.libs/libscigraphic_objects-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/scinotes/.libs/libsciscinotes-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/ui_data/.libs/libsciui_data-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/history_browser/.libs/libscihistory_browser-disable.so
/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/commons/.libs/libscicommons-disable.so
-llapack -lblas -lxml2 -lz
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64
-L/lib/../lib64 -L/usr/lib/../lib64
-L/usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../.. -lgfortran
-lquadmath ./modules/console/.libs/libsciconsole-minimal.so
./modules/jvm/.libs/libscijvm-disable.so -lpthread -ldl
-lcurses -lm -Wl,-rpath
-Wl,/work/ADM/hpc/leboucl/INSTALL/rh7/scilab/5.5.2/lib/scilab<o:p></o:p></p>
<p class="MsoNormal">/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/.libs/libscilab-cli.so:
undefined reference to `dgeqpf_'<o:p></o:p></p>
<p class="MsoNormal">/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2/modules/.libs/libscilab-cli.so:
undefined reference to `zgeqpf_'<o:p></o:p></p>
<p class="MsoNormal">collect2: error: ld returned 1 exit status<o:p></o:p></p>
<p class="MsoNormal">make[1]: *** [scilab-bin] Error 1<o:p></o:p></p>
<p class="MsoNormal">make[1]: Leaving directory
`/work/ADM/hpc/leboucl/2017-SUPPORT/SCILAB/SOURCE/scilab-5.5.2'<o:p></o:p></p>
<p class="MsoNormal">make: *** [all-recursive] Error 1<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span lang="EN-US">Do you have any idea
about what is missing to find the symbol dgeqpf_ and
zgeqpf_ ? In which library should I find them?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal">Thanks,<o:p></o:p></p>
<p class="MsoNormal">Lise<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<br>
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Paul BIGNIER
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